2006 Rookie Draft
| 1 | 2 | 3 | 4 | 5 | ||
| 1 | THM | THM: Zimmerman | THM: Lester (nc) | THM: Astacio | GTG : Shealy | THM: Damon Hollins |
| 2 | NPB | NPB: Drew (nc) | WWE: Duffy | WWE Br Thompson | NPB: Rodney | MCD Andrus(nc) |
| 3 | BMW | BMW: Dan Johnson | BMW: Maholm | NPB: Moehler | BMW: Ellison | BMW: Fick |
| 4 | FYS | MCD: Kendrick(nc) | FYS: Sullivan | MBB: Ron Cedeno | FYS: J Weaver (nc) | FYS: Bankston(nc) |
| 5 | BMH | BMW: Cano | GTG: C Gonzales(nc) | BMH: Ken Morales (nc) | SSW: McClouth | LIP: Eduardo Perez |
| 6 | SJH | SJH: F. Liriano (nc) | ULO: Zumaya (nc) | MBB: Mi Jacobs | WWE: Jos Bautista | WWE: Quintinilla |
| 7 | SIS | SIS: Saltalamacchia(nc) | NPB: KeJohnson | SIS: W Rodriguez | GRC: ByKim | NWP: Carvajal |
| 8 | QCK | BMW: Alex Gordon (nc) | QCK: Broxton (nc) | QCK: Hirsh (nc) | QCK: Borowski | QCK: Matt Diaz |
| 9 | SHS | SHS: Brandon Wood (nc) | SHS: Al Reyes | SHS: Spurling | SHS: Eveland | GTG Martinez-Esteve(nc) |
| 10 | SEX | SEX: Hayden Penn | SEX: Clement(nc) | SEX: Pet Walker | SEX: Niekro | RB2: P Phillips |
| 11 | RBJ | RBJ: Chen Wang | RBJ: MacDougal | RBJ: Uggla (nc) | MBB: McCutcheon (nc) | BMW: Niemann (NC) |
| 12 | MBB | LVL: Verlander (nc) | RB2: Willingham (nc) | MBB: J Dominguez | MBB: Jhowell | RB2: Shackleford |
| 13 | GRC | GRC: Iguchi | GRC: Langerhans | GRC: Dempster | GRC: Houlton | RBJ: Flores |
| 14 | MFM | MFM: JoGomes | MFM: Orvella | MFM: Guerrier | MFM: Dessens | MFM: CL Vargas |
| 15 | GTG | MCD: RusMartin(nc) | SSW: Small | GTG: Em Brown | GTG: Ohman | SJH: Belisle |
| 16 | BMS | SJH: Doumit | LIP: Cr Young (nc) | WWE: RuSpringer | BMS: Fiorentino | BMS: Denorfia |
| 17 | LVL | MBB: Markakis(nc) | GTG: Murton | MCD: Stauffer | LVL: Robles | LIP: JoPeralta |
| 18 | NPP | NPP: Ybetancourt | NPP: Hensley | NPP: Ju Padilla | NPP: Derosa | BMS: Eldred |
| 19 | GCB | NPB: C Hansen (nc) | GCB: Toluwitzsky(nc) | GCB: Fasano | GCB: Sowers(nc) | WWE: Volquez (nc) |
| 20 | ULO | ULO: Jenks | RB2: Majewski | SJH K Correia | ULO:Medders | ULO: AnaSanchez(nc) |
| 21 | RB2 | RB2: Turnbow | MBB: R Braun (nc) | SJH: Garko(nc) | SIS: Bannister (nc) | MBB: BenJohnson |
| 22 | LIP | LIP: Carrasco | LIP: Helling | BMS: P Hughes (nc) | GTG: DeJean | LIP: LuiRodriguez |
| 23 | MCD | MCD: F Cabrera | MCD: R Tejeda | NPP: Helms | BMS: Snelling | NWP: Melillo (nc) |
| 24 | WWE | SJH: J Vargas | THM: N Walker(nc) | NWP: Ces Carillo(nc) | WWE: Morse | SIS: Ozuna |
| 25 | SSW | NPB: Ray | SSW: W Aybar | GRC: Ardoin | MBB: Accardo | BMH: DuBois |
| 26 | NWP | RBJ: Loe | SEX: Maybin(nc) | NWP: Burgos | MBB: Rich Hill | GRC: Cortes |
| 6 | 7 | 8 | 9 | 10 | ||
| 1 | THM | THM: McEwing | THM: Pass | THM: pass | THM: Pass | THM: Pass |
| 2 | NPB | NPB: Bennett | MBB: Boyer | MBB: CJWilson | MBB: BriJordan | MBB: T Blanco |
| 3 | BMW | BMW: Luna | BMW: Yabu | BMW: pass | BMW: Pass | BMW: Pass |
| 4 | FYS | FYS: RenRivera | FYS: Gln Williams | FYS: Harville | FYS: Wellemeyer | FYS: Jake Woods |
| 5 | BMH | BMH: Wunsch | BMH:Jef Baker | BMH: Giarratano | BMH: Garabito | BMH: Lehr |
| 6 | SJH | QCK: AdmJones(nc) | SJH: Dobbs | SJH: Pass | SJH: Pass | SJH: Pass |
| 7 | SIS | MFM: Dukes (nc) | SIS: L Nunez | SIS: Pass | SIS: pass | SIS: Pass |
| 8 | QCK | QCK: Widger | QCK Ambres | QCK: Quiroz | QCK: Aguila | QCK: Treanor |
| 9 | SHS | SHS: Pt Orr | SHS: Dohman | SHS: Tyner | SHS: Pass | SHS: pass |
| 10 | SEX | SEX: Repko | SEX: DaRoss | SEX: Pass | SEX: Pass | SEX: Pass |
| 11 | RBJ | RBJ: JeffHarris | RBJ: Pass | RBJ: Pass | RBJ: Pass | RBJ: Pass |
| 12 | MBB | !!! | RBJ Eric Reed(nc) | MBB: Messenger | MBB:Andino | MBB: Erickson |
| 13 | GRC | SSW: JonMcDonald | GRC: Glover | GRC: DenSpan(nc) | GRC: Garza (nc) | GRC: Dar May |
| 14 | MFM | MFM: Lerew(nc) | MFM: Munter | MFM: Pass | MFM: Pass | MFM: Pass |
| 15 | GTG | GTG: J Rodriguez | GCB: Eischen | THM: pass | GTG: Gall | GTG: Shouse |
| 16 | BMS | BMS: BrWatson | BMS: JulSantana | BMS: Don Murphy | BMS: Costa | BMS: Sauerbeck |
| 17 | LVL | LVL: Keith Foulke | BMW: Mike Edwards | LVL: Nippert(nc) | LVL: Pass | LVL: pass |
| 18 | NPP | NPP: MarSanders(nc) | NPP: Novoa | NPP: Matt Watson | NPP: Andy Green | NPP: Pass |
| 19 | GCB | GCB: McCracken | GCB: Baerga | GCB: Mondesi | GCB: Bubba Crosby | GCB: pass |
| 20 | ULO | BMS: Affeldt | BMS: RicRodriguez | BMS: Humber (nc) | ULO: Pass | ULO: pass |
| 21 | RB2 | RB2: Baldwin | RB2: Ludwick | RB2: Pass | RB2: Pass | RB2: pass |
| 22 | LIP | GTG: Jfoster | LIP: Kotteras(nc) | LIP: MiBurns | LIP: Eddie Perez | LIP: pass |
| 23 | MCD | NPP: CH Park | MCD: RamColon | MCD: Seabol | MCD: Keisler | MCD: De La Rosa |
| 24 | WWE | SHS: Osoria | LVL: G Gil | LVL: Nomo | WWE: Pass | WWE: pass |
| 25 | SSW | SSW: ChkJames (nc) | !!! | SSW: Ethier (nc) | SSW: Bergola | SSW: Raul Chavez |
| 26 | NWP | NWP: Guiel | NWP: Heath Bel | NWP: Schmoll | NWP: Botts | NWP Quintero |
| 11 | 12 | 13 | ||||
| 1 | THM | THM | THM | |||
| 2 | NPB | MBB | MBB: Devine (nc) | |||
| 3 | BMW | BMW | BMW | |||
| 4 | FYS | FYS | FYS | |||
| 5 | BMH | BMH | (NC) | |||
| 6 | SJH | SJH | SJH | |||
| 7 | SIS | SIS | SIS | |||
| 8 | QCK | QCK | QCK | |||
| 9 | SHS | SHS | SHS | |||
| 10 | SEX | SEX | SEX | |||
| 11 | RBJ | RBJ | RBJ | |||
| 12 | MBB | MBB | MBB | |||
| 13 | GRC | GRC: Gosling | GRC | |||
| 14 | MFM | MFM | MFM | |||
| 15 | GTG | GTG: RiWhite | GTG: Dingman | Wiki Gonzalez | ||
| 16 | BMS | BMS | BMS | |||
| 17 | LVL | LVL | LVL | |||
| 18 | NPP | NPP | NPP | |||
| 19 | GCB | GCB | GCB | |||
| 20 | ULO | ULO | ULO | |||
| 21 | RB2 | RB2 | RB2 | |||
| 22 | LIP | LIP | LIP | |||
| 23 | MCD | MCD: LaForest | MCD: Camp | MCD Walt Young | ||
| 24 | WWE | WWE | WWE | |||
| 25 | SSW | SSW: Bernie Castro | SSW: Andy Phillips | SSW: Angel Chavez | ||
| 26 | NWP | NWP: Luke Scott | NWP | |||